Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015878365.1_cds_XP_016436776.1_32601
CDS Infomation

[gene=LOC107762893] [db_xref=GeneID:107762893] [protein=phosphoinositide phosphatase SAC8-like isoform X2] [protein_id=XP_016436776.1] [location=join(49170..49323,49419..49493,50756..50883,50992..51083,51174..51231,51659..51715,51889..51922,52081..52161,52258..52364,55156..55242,55322..55399,55883..55947,56413..56511,56635..56734,56871..56979,57067..57139,57223..57316,57419..57505,57862..57928,58060..58184)] [gbkey=CDS]
Sequence

ATGGAAATTGAAGCAAATTCAATTCAACATTTTAAGCTATGGAGCCAATTGGAATTACAT
GAATTTGCAGACAAATTCGTTATCCGTTCAACGGAATCTCCAATTGAAGGCTTCTCCGTT
AACCGCTTCGATGGAACCATCCACAAGCTCAATGGTAATATGAGCTTTGGAAATCCTTCA
AAAGTGTCTACTATCTATGGAGTCGCTGGTACAATTAGGTTGTTGGCAGGATCACATATA
TTGTTAATAACTTCCAGGAAGGAAGTAGGTAACTATCTTGGTTTTCCTGTTTTTCGTGTG
ATGTCCATGAAGTTACTTTCATGCAATGAGGCCTCAACATGTCTAACAAGTGAAGAAAAA
AAAGATGAAGCTTACTTCATGAATTTGTTGAGAGTAGTGGAATCAACTCCAGGCTTGTAT
TATTCCTATGAAACAGATATAACACTGAACTTGCAGAGAAGATGCAATTTGGCAAAAGGG
TGGATGAGTAAACCAGTTTGGAAGCAGGCTGATCCGCGGTTTGTTTGGAACAAAAATCTG
TTGGAGGAACTGATTGAAAATAAGCTCGATGGATTCATCATTCCTCTTTTGCAAGGAAGC
TTTCAGACTGGACATCTTAAACTCAAAGAATCACCAGCTACCATAGCATTGATTTCAAGG
AGATGCACGCGACGCTTGGGGACACGAATGTGGAGAAGAGGGGCTAATCTAGAAGGAGAC
ACTGCAAATTTTATTGAAACTGAGCAGTTGCTGGAGTTTGAAGGTTTCAGGTCTTCTTTT
TTGCAAGTTCGAGGTTCTATTCCACTCTTGTGGGAGCAAATAGTTGATTTGAGCTATAAA
CCACGGCTTAATATTATCTATCATGAGGAAACACCGAAAGTTGTGGAGCGCCACTTTCAT
GATCTTTTGCAAAGATATGGCGATGTCATTGCAGTTGACTTGACAAACAAGCTAGGTGAT
GAGGGTCTATTAAGTTCAGCTTATGCAACAGAAACTCAAAAGCTATCAAGTGTGAGATAT
GTGTCGTTTGACTTTCATCACTGTTGTGGGGGCTCAAACTTTGAAAAAATACAACTTCTG
TATGATCAGATCTCGGAGGATTTTGAGAAGCACGGATACTTCCTCATAGACACAGAAGAG
AAGATACTAGCGGAGCAGAGAGGAGTTATTAGATCGAACTGCATTGACTGCCTAGATCGG
ACAAATGTTACTCAGAGCTACCTGGCTCAGAAGTCTTTGAATTCACAACTGCAAAGACTT
GGTGCACTTTCGTCGAATGAGTGCATTTCTATGTTCAGTGAAGATTTTGAAATCTTTAGG
ACTATGTGGGTGGATCAAGGTGATGAAATCAGCCTGGAATATTCTGGAACACATGCTCTA
AAGCGGGACCTTGTCAGATATGGAAAACAGACTATGACAGGACTTATACAAGATGGGATG
AGTGCCCTTTCAAGATACTTCTTGAACAATTTTCAGGATGGAGTTCGTCAGGATGCGATG
GACCTTATAAGTGGTCGCTATAGTGTTAACAGGGGAAGCCCCTCCCGTGTCCAGCATAAT
GGATTAGAATCACTCAGTTATCTACCTGTAGCATCAGCTCTTTTAATTGGAGGATTGACC
GTGACCACCATCACGATAAACCAAGGACGAAATACAAATACCTATTTGTCCTCTGTGCTC
TGTGCTGGTGTAACTGCTGGAGTTATGGCAATTGTCAAAGCAAATGGAAGGCAAATCTGC
TCAAGACCTCGATTATGTGGACTGCTGTAA

Peptide Sequence

PEP ID

XP_016436776.1
PEP Infomation

PREDICTED: phosphoinositide phosphatase SAC8-like isoform X2 [Nicotiana tabacum]
Sequence

MEIEANSIQHFKLWSQLELHEFADKFVIRSTESPIEGFSVNRFDGTIHKLNGNMSFGNPS
KVSTIYGVAGTIRLLAGSHILLITSRKEVGNYLGFPVFRVMSMKLLSCNEASTCLTSEEK
KDEAYFMNLLRVVESTPGLYYSYETDITLNLQRRCNLAKGWMSKPVWKQADPRFVWNKNL
LEELIENKLDGFIIPLLQGSFQTGHLKLKESPATIALISRRCTRRLGTRMWRRGANLEGD
TANFIETEQLLEFEGFRSSFLQVRGSIPLLWEQIVDLSYKPRLNIIYHEETPKVVERHFH
DLLQRYGDVIAVDLTNKLGDEGLLSSAYATETQKLSSVRYVSFDFHHCCGGSNFEKIQLL
YDQISEDFEKHGYFLIDTEEKILAEQRGVIRSNCIDCLDRTNVTQSYLAQKSLNSQLQRL
GALSSNECISMFSEDFEIFRTMWVDQGDEISLEYSGTHALKRDLVRYGKQTMTGLIQDGM
SALSRYFLNNFQDGVRQDAMDLISGRYSVNRGSPSRVQHNGLESLSYLPVASALLIGGLT
VTTITINQGRNTNTYLSSVLCAGVTAGVMAIVKANGRQICSRPRLCGLL

Transcript Sequence

Gene sequence data has not been registered.